miRBase entry: lhy-mir-2d

Stem-loop lhy-mir-2d


Accession
MI0043102
Description
Laevipilina hyalina lhy-mir-2d precursor miRNA


Sequence


gcgcagcccacaagacauugggugucguggACCAUCAAUGCUGGGUGUAAUAguccgacggucgcuucuaUCACAGCCAGCUUUGAUGAGCCauguucguccaagaaccgucgacgagccuc
(((..(((((........)))))..)))((..((((((.(((((.(((.((((..(((...)))...)))).))).))))).))))))..))..(((((((...........)))))))...

Structure
--gcgcagcccacaagacauugggugucgu  AC      U     G   A    -uc   c 
                              gg  CAUCAA GCUGG UGU AUAg   cga  
                              ||  |||||| ||||| ||| ||||   ||| g
                              CC  GUAGUU CGACC ACA Uauc   gcu  
cuccgagcagcugccaagaaccugcuugua  GA      U     G   C    uuc   g 


Annotation confidence Not enough data
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Genome context
scaffold155753_41.9: 2057-2118 []
Clustered miRNAs
6 other miRNAs are < 10 kb from lhy-mir-2d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lhy-miR-2d-5p

Accession MIMAT0065466
Description Laevipilina hyalina lhy-miR-2d-5p mature miRNA
Sequence 31 - ACCAUCAAUGCUGGGUGUAAUA - 52
Evidence not_experimental

Mature lhy-miR-2d-3p

Accession MIMAT0065465
Description Laevipilina hyalina lhy-miR-2d-3p mature miRNA
Sequence 71 - UCACAGCCAGCUUUGAUGAGCC - 92
Evidence not_experimental

References