miRBase entry: lpo-mir-87k

Stem-loop lpo-mir-87k


Accession
MI0043268
Description
Limulus polyphemus lpo-mir-87k precursor miRNA


Sequence


caauguuuuacaaaguucugccaggcugcuGUGCCUGAAAUCUUGUCUCAACCUaauuaacuuguagagGUGAGCAAAGUUUCAGGUGUGUcaacuuggagagacaaucagaaggaaguag
........(((....((((((((((.(((..((((((((((.(((.((((.(((.((......))..)))))))))).)))))))))).).)).))))).........)))))....))).

Structure
caauguuu   aaag     ---------     c  - uG          C   U    A   -a  ua 
        uac    uucug         ccagg ug c  UGCCUGAAAU UUG CUCA CCU  au  a
        |||    |||||         ||||| || |  |||||||||| ||| |||| |||  ||   
        aug    aagac         gguuc ac G  GUGGACUUUG AAC GAGU Gga  ug  c
-------g   aagg     uaacagaga     a  U -U          A   -    -   ga  uu 


Annotation confidence Not enough data
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Genome context
NW_013665817.1: 444807-444867 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lpo-mir-87k
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lpo-miR-87k-5p

Accession MIMAT0065690
Description Limulus polyphemus lpo-miR-87k-5p mature miRNA
Sequence 31 - GUGCCUGAAAUCUUGUCUCAACCU - 54
Evidence not_experimental

Mature lpo-miR-87k-3p

Accession MIMAT0065689
Description Limulus polyphemus lpo-miR-87k-3p mature miRNA
Sequence 70 - GUGAGCAAAGUUUCAGGUGUGU - 91
Evidence not_experimental

References