miRBase entry: csc-mir-96a

Stem-loop csc-mir-96a


Accession
MI0043440
Description
Centruroides sculpturatus csc-mir-96a precursor miRNA


Sequence


aagcucguacuguaccguacuccuccguucUUUGGCACUAGCACAUUUUUGUguuccugucguacgacAAAAAUUGUAGUAGUGUCAAGUAacacggggaggccgacguccgauccuucgg
...............((..((((.((((..((((((((((..((((((((((((.........)).))))))).)))..))))))))))....))))))))..))....((((....))))

Structure
-aagcucguacuguac  ua    u    --uc          GC   -       -  ucc 
                cg  cucc ccgu    UUUGGCACUA  ACA UUUUUGU gu   u
                ||  |||| ||||    ||||||||||  ||| ||||||| ||   g
                gc  gagg ggca    GAACUGUGAU  UGU AAAAAca ca   u
ggcuuccuagccugca  cg    -    caAU          GA   U       g  ugc 


Annotation confidence Not enough data
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Genome context
NW_019385290.1: 225058-225118 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from csc-mir-96a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature csc-miR-96a-5p

Accession MIMAT0065956
Description Centruroides sculpturatus csc-miR-96a-5p mature miRNA
Sequence 31 - UUUGGCACUAGCACAUUUUUGU - 52
Evidence not_experimental

Mature csc-miR-96a-3p

Accession MIMAT0065957
Description Centruroides sculpturatus csc-miR-96a-3p mature miRNA
Sequence 69 - AAAAAUUGUAGUAGUGUCAAGUA - 91
Evidence not_experimental

References