miRBase entry: csc-mir-2a-3

Stem-loop csc-mir-2a-3


Accession
MI0043469
Description
Centruroides sculpturatus csc-mir-2a-3 precursor miRNA


Sequence


gaagaaaacuggagauagcuguguuuccacUCAUCAAAGUGGCUCUGAUGUGuuuuauuaauuuucaUAUCACAGCCAGCUUUGAUGAGCgaaaacauuggcaguugucaacuuuuuaaa
.....(((..(..(((((((((((((.(.(((((((((((((((.(((((((.............))))))).))))).)))))))))).).))))....)))))))))..)..)))...

Structure
gaaga   cu ga         ----    c a          -     C       uuuua 
     aaa  g  gauagcugu    guuu c cUCAUCAAAG UGGCU UGAUGUG     u
     |||  |  |||||||||    |||| | |||||||||| ||||| |||||||     u
     uuu  c  cuguugacg    caaa g GAGUAGUUUC ACCGA ACUAUac     a
--aaa   uu aa         guua    a C          G     C       uuuua 


Annotation confidence Not enough data
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Genome context
NW_019384652.1: 439498-439557 []
Clustered miRNAs
4 other miRNAs are < 10 kb from csc-mir-2a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature csc-miR-2a-3-5p

Accession MIMAT0066006
Description Centruroides sculpturatus csc-miR-2a-3-5p mature miRNA
Sequence 31 - UCAUCAAAGUGGCUCUGAUGUG - 52
Evidence not_experimental

Mature csc-miR-2a-3-3p

Accession MIMAT0066005
Description Centruroides sculpturatus csc-miR-2a-3-3p mature miRNA
Sequence 68 - UAUCACAGCCAGCUUUGAUGAGC - 90
Evidence not_experimental

References