Stem-loop gpa-mir-1000

Accession

MI0043512

Description

Glossina pallidipes gpa-mir-1000 precursor miRNA

Sequence

agaagaauggaaacgaaacgauugccauugAUAUUGUCCUGUCACAGCAGUAugugauuucuuucaauauauuaCUGCUGGGCCGGGGCAUUAACAcuguuggucguuguagacaacguuuaucau
.((.(((((.......((((((((.((.((.((.(((((((((.((((((((..(((......)))......)))))))))).))))))).)).)).)).))))))))........))))).))..

Structure

-a  a     -gaaacga        c  u  A  U       -  A        ----ug   uu 
  ga gaaug        aacgauug ca ug UA UGUCCUG UC CAGCAGUA      uga  u
  || |||||        |||||||| || || || ||||||| || ||||||||      |||   
  cu uuugc        uugcuggu gu AC AU ACGGGGC GG GUCGUCau      acu  c
ua  a     aacagaug        u  c  A  U       C  -        uauaua   uu 

Annotation confidence Not enough data

Genome context

Scaffold138: 468598-468663 [+]

Mature gpa-miR-1000-5p

• Accession: MIMAT0066087
• Description: Glossina pallidipes gpa-miR-1000-5p mature miRNA
• Sequence: 31 - AUAUUGUCCUGUCACAGCAGUA - 52
• Evidence: not_experimental

Mature gpa-miR-1000-3p

• Accession: MIMAT0066088
• Description: Glossina pallidipes gpa-miR-1000-3p mature miRNA
• Sequence: 75 - CUGCUGGGCCGGGGCAUUAACA - 96
• Evidence: not_experimental

References