Accession
MI0043577
Description
Glossina pallidipes
gpa-mir-79 precursor miRNA
Sequence
augugugcuaugcgcauguuauauuucauuGCUUUGGCGCUUUAGCUGUAUGauagauuugauaccuucaUAAAGCUAGAUUACCAAAGCAUugaaaaugcgccuacaacugcaguaauuuu
.(((((..((.((((((......(((((.((((((((...(((((((.(((((..(........)..))))).)))))))...)))))))).))))))))))).))..)).)))........
.(((((..((.((((((......(((((.((((((((...(((((((.(((((..(........)..))))).)))))))...)))))))).))))))))))).))..)).)))........
Structure
-------a - gc u guuaua u CGC G ua auu
ugu gu ua gcgcau uuuca uGCUUUGG UUUAGCU UAUGa g u
||| || || |||||| ||||| |||||||| ||||||| ||||| |
acg ca au cgcgua aaagu ACGAAACC AGAUCGA AUacu c g
uuuuaaug u ac c ------ U AUU A uc aua
Annotation confidence
Not enough data
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Genome context
Scaffold60: 382326-382387 []
Clustered miRNAs
3 other miRNAs are < 10 kb from gpa-mir-79
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gpa-miR-79-5p
| Accession | MIMAT0066216 |
| Description | Glossina pallidipes gpa-miR-79-5p mature miRNA |
| Sequence | 31 - GCUUUGGCGCUUUAGCUGUAUG - 52 |
| Evidence | not_experimental |
Mature gpa-miR-79-3p
| Accession | MIMAT0066215 |
| Description | Glossina pallidipes gpa-miR-79-3p mature miRNA |
| Sequence | 71 - UAAAGCUAGAUUACCAAAGCAU - 92 |
| Evidence | not_experimental |
References
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