miRBase entry: ovu-mir-12652

Stem-loop ovu-mir-12652


Accession
MI0043679
Description
Octopus vulgaris ovu-mir-12652 precursor miRNA


Sequence


ucaauaaugugaguuuugccccaguggagcUGGUUUUGUGAGAUGUUCAUUGGuuacauaaaauauucAGUGACCAUCUCUAAAACUAACuuuccugguggucauaacaacuucauauac
......(((((((((.((((((((.((((.((((((((.((((((.(((((((.............))))))).)))))))))))))).)))).)))).)).)).)))....))))))..

Structure
ucaaua      ----   u  -  -    u    c        U      U       uuaca 
      auguga    guu ug cc ccag ggag UGGUUUUG GAGAUG UCAUUGG     u
      ||||||    ||| || || |||| |||| |||||||| |||||| |||||||     a
      uauacu    caa ac gg gguc uuuC AUCAAAAU CUCUAC AGUGAcu     a
----ca      ucaa   u  u  u    c    A        -      C       uauaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
RXHP01076294.1: 178113-178172 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ovu-mir-12652
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ovu-miR-12652-5p

Accession MIMAT0066416
Description Octopus vulgaris ovu-miR-12652-5p mature miRNA
Sequence 31 - UGGUUUUGUGAGAUGUUCAUUGG - 53
Evidence not_experimental

Mature ovu-miR-12652-3p

Accession MIMAT0066417
Description Octopus vulgaris ovu-miR-12652-3p mature miRNA
Sequence 69 - AGUGACCAUCUCUAAAACUAAC - 90
Evidence not_experimental

References