miRBase entry: sne-mir-12873

Stem-loop sne-mir-12873


Accession
MI0043865
Description
Seison nebaliae sne-mir-12873 precursor miRNA


Sequence


agcacucuuaucaauuauacgaugaucggaGGAUGAAUGUUUCACGGUUGAUGuuguuuauuuguauucaauuucauaugaaucccacucgcugaaguucaauucauauuuaauuugaauucauuaaauuuuauuccuuauuucgcaUCACCGGGUUUCACACAUCCUCugacuucguaucaacaacgacuacuucucu
................((((((.(.((((((((((..((.....((((.(((((.(((((..((.((((((((..((((((((...(((......)))...))))))))..)).)))))).)).)))))...............))))))))).....))..))))))))))).))))))...................

Structure
---agcacucuuaucaauu      u a          AA  UUUCA    U     --------------u     uu  u      -  uc        ccc   cg 
                   auacga g ucggaGGAUG  UG     CGGU GAUGu               guuua  ug auucaa uu  auaugaau   acu  c
                   |||||| | ||||||||||  ||     |||| |||||               |||||  || |||||| ||  ||||||||   |||   
                   uaugcu c aguCUCCUAC  AC     GCCA CUacg               uaaau  ac uaaguu aa  uauacuua   uga  u
ucucuucaucagcaacaac      u -          AC  UUUGG    -     cuuuauuccuuauuu     -u  u      u  uu        acu   ag 


Annotation confidence Not enough data
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Genome context
k141_5132: 25382-25520 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sne-mir-12873
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sne-miR-12873-5p

Accession MIMAT0066779
Description Seison nebaliae sne-miR-12873-5p mature miRNA
Sequence 31 - GGAUGAAUGUUUCACGGUUGAUG - 53
Evidence not_experimental

Mature sne-miR-12873-3p

Accession MIMAT0066778
Description Seison nebaliae sne-miR-12873-3p mature miRNA
Sequence 148 - UCACCGGGUUUCACACAUCCUC - 169
Evidence not_experimental

References