Stem-loop sne-mir-1

Accession

MI0043867

Description

Seison nebaliae sne-mir-1 precursor miRNA

Sequence

uccaucaaucaaauuuucauauuauucauuACAUACUUCAUAAUAUUCAAUAuugcuuugcagugauggacuaaguuuugagagaagauucgauuuuauccaauuuucuaacaaagaaaauuuugggauugaucguuucaauucaaucgaacuauucuugucuauacauuugacuguuaUGGAAUGUAAUGAAGUAUGUUGuguuaauaugaucaacaucacaaaauaugg
................((((((((..(((.(((((((((((.((((((.(((..((..(..((((((((((.(((.(((((..(((((..(((((..((((((((((((.....))))))))...)))).)))))..))..)))..))))).....))))))))).))))..)..))))).)))))).))))))))))).))).))))))))...................

Structure

---uccaucaaucaaauuu        uu   u           A      A   uu  uu gc    -      u   ----u     ga   --  uu     uu    ---        a 
                   ucauauua  cau ACAUACUUCAU AUAUUC AUA  gc  u  agug auggac aag     uuuga  gaa  ga  cgauu  aucc   aauuuucu a
                   ||||||||  ||| ||||||||||| |||||| |||  ||  |  |||| |||||| |||     |||||  |||  ||  |||||  ||||   |||||||| c
                   aguauaau  guG UGUAUGAAGUA UGUAAG Uau  ug  a  uuac uaucug uuc     aagcu  cuu  cu  gcuag  uagg   uuaaaaga a
gguauaaaacacuacaacu        -u   U           A      G   --  uc gu    a      -   uuauc     aa   aa  uu     -u    guu        a 

Annotation confidence Not enough data

Genome context

k141_2204: 23493-23663 []

Mature sne-miR-1-5p

• Accession: MIMAT0066783
• Description: Seison nebaliae sne-miR-1-5p mature miRNA
• Sequence: 31 - ACAUACUUCAUAAUAUUCAAUA - 52
• Evidence: not_experimental

Mature sne-miR-1-3p

• Accession: MIMAT0066782
• Description: Seison nebaliae sne-miR-1-3p mature miRNA
• Sequence: 180 - UGGAAUGUAAUGAAGUAUGUUG - 201
• Evidence: not_experimental

References