miRBase entry: ava-mir-12892

Stem-loop ava-mir-12892


Accession
MI0043889
Description
Adineta vaga ava-mir-12892 precursor miRNA


Sequence


uuugucaaacguguaugaaugugugucaaaUACUGUUCUGCUUGUGCCGCGCUacgcaaauugaaagugagCGAAGUACAACAGACAGUAAAugacgccaucaguaucaacacuuauuuuag
..........((((.((((((.((((((..((((((.(((.((((((..((((.(((.........)))))))..)))))))))))))))..))))))))).....))))))).........

Structure
uuugucaaac    a   -----   u      aa      U   C      CG    a   aaa 
          gugu uga     aug guguca  UACUGU CUG UUGUGC  CGCU cgc   u
          |||| |||     ||| ||||||  |||||| ||| ||||||  |||| |||   u
          caca acu     uac cgcagu  AUGACA GAC AACAUG  GCga gug   g
-gauuuuauu    -   augac   -      AA      -   -      AA    -   aaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CP075497.1: 2491342-2491403 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from ava-mir-12892
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ava-miR-12892-5p

Accession MIMAT0066825
Description Adineta vaga ava-miR-12892-5p mature miRNA
Sequence 31 - UACUGUUCUGCUUGUGCCGCGCU - 53
Evidence not_experimental

Mature ava-miR-12892-3p

Accession MIMAT0066826
Description Adineta vaga ava-miR-12892-3p mature miRNA
Sequence 72 - CGAAGUACAACAGACAGUAAA - 92
Evidence not_experimental

References