miRBase entry: ava-mir-12897-2

Stem-loop ava-mir-12897-2


Accession
MI0043895
Description
Adineta vaga ava-mir-12897-2 precursor miRNA


Sequence


aagucgaugcauuucuucuuauacgguagaCACUGUUCGUCUUGCCUCGCUcgaugauaaucaaugaagCGAAGUUUGUCGAUCAGUACCcuccgauaagauuuuauaugcuuucauauu
.....((.((((....((((((.(((..(..((((.(((.(..((.(((((((.(((...))).)).))))).))..).))).))))..)..)))))))))......))))..)).....

Structure
aaguc  -u    --uucu      a   ua aC    U   U UU  C     -  a   u 
     ga  gcau      ucuuau cgg  g  ACUG UCG C  GC UCGCU cg uga  
     ||  ||||      |||||| |||  |  |||| ||| |  || ||||| || ||| a
     cu  cgua      agaaua gcc  C  UGAC AGC G  UG AGCga gu acu  
uuaua  uu    uauuuu      -   uc CA    U   U UU  A     a  a   a 


Annotation confidence Not enough data
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Genome context
CP075494.1: 15756821-15756880 []
Clustered miRNAs
2 other miRNAs are < 10 kb from ava-mir-12897-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ava-miR-12897-2-5p

Accession MIMAT0066836
Description Adineta vaga ava-miR-12897-2-5p mature miRNA
Sequence 31 - CACUGUUCGUCUUGCCUCGCU - 51
Evidence not_experimental

Mature ava-miR-12897-2-3p

Accession MIMAT0066837
Description Adineta vaga ava-miR-12897-2-3p mature miRNA
Sequence 70 - CGAAGUUUGUCGAUCAGUACC - 90
Evidence not_experimental

References