Stem-loop ava-mir-279-1

Accession

MI0043933

Description

Adineta vaga ava-mir-279-1 precursor miRNA

Sequence

aucuuugaagagaagagcucuccgauucauAUGAUUGUGUUAUUUAGUCUAUGugguuuuugcaaguucaUGACUAGAUCUCACACUCAUCCuaauugagagcaccuucacuugauauauua
.....(.(((.((((.((((((.((((...((((.((((..((((((((.(((.(.((.....)).).)))))))))))..)))).))))...))))))))))..)))).))).).......

Structure

--aucuu g   a    -a      c    cau    U    UU        U   u g  u 
       u aag gaag  gcucuc gauu   AUGA UGUG  AUUUAGUC AUG g uu u
       | ||| ||||  |||||| ||||   |||| ||||  |||||||| ||| | || u
       a uuc cuuc  cgagag uuaa   UACU ACAC  UAGAUCAG Uac u aa g
auuauau g   a    ca      -    uCC    C    UC        -   u g  c 

Annotation confidence Not enough data

Genome context

CP075496.1: 5842529-5842590 []

Clustered miRNAs

2 other miRNAs are < 10 kb from ava-mir-279-1

Mature ava-miR-279-1-5p

• Accession: MIMAT0066904
• Description: Adineta vaga ava-miR-279-1-5p mature miRNA
• Sequence: 31 - AUGAUUGUGUUAUUUAGUCUAUG - 53
• Evidence: not_experimental

Mature ava-miR-279-3p

• Accession: MIMAT0066902
• Description: Adineta vaga ava-miR-279-3p mature miRNA
• Sequence: 71 - UGACUAGAUCUCACACUCAUCC - 92
• Evidence: not_experimental

References