miRBase entry: ava-mir-12942-2

Stem-loop ava-mir-12942-2


Accession
MI0043967
Description
Adineta vaga ava-mir-12942-2 precursor miRNA


Sequence


uuucuucucuucguuugacauauuacuaaaGCUAGGUGGAACUUCGGUAGAgguggauaugaaaaugauuucUCACCGGGUUCUACACUUAGCUUuagugaugauguuuuuaaagaauaauuuag
.......((((.....(((((((((((((((((((((((((((.((((((((((.............)))))).)))))))))..))))))))))))))))).)))))....)))).........

Structure
--uuucuuc    cguuu     -                 --     U    -      ggaua 
         ucuu     gacau auuacuaaaGCUAGGUG  GAACU CGGU AGAggu     u
         ||||     ||||| |||||||||||||||||  ||||| |||| ||||||     g
         agaa     uugua uagugauUUCGAUUCAC  CUUGG GCCA Ucuuua     a
gauuuaaua    -auuu     g                 AU     -    C      guaaa 


Annotation confidence Not enough data
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Genome context
CP075496.1: 5842400-5842464 []
Clustered miRNAs
2 other miRNAs are < 10 kb from ava-mir-12942-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ava-miR-12942-2-5p

Accession MIMAT0066966
Description Adineta vaga ava-miR-12942-2-5p mature miRNA
Sequence 31 - GCUAGGUGGAACUUCGGUAGA - 51
Evidence not_experimental

Mature ava-miR-12942-2-3p

Accession MIMAT0066965
Description Adineta vaga ava-miR-12942-2-3p mature miRNA
Sequence 73 - UCACCGGGUUCUACACUUAGCUU - 95
Evidence not_experimental

References