Accession
MI0043998
Description
Brachionus plicatilis
bpl-mir-12958-1 precursor miRNA
Sequence
aguggaucagugagucaacucgcuucagugCACUAAAAUACGGUAUAGCGGGuagguaguaacgacCGCUGUGCCCUAUUUUAGUACCacugaacgggugcacagagcuacgcaaauuu
.((((.((.(((...((.((((.(((((((.(((((((((.((((((((((...(.......)..)))))))))).)))))))))..)))))))))))))))).)).))))........
.((((.((.(((...((.((((.(((((((.(((((((((.((((((((((...(.......)..)))))))))).)))))))))..)))))))))))))))).)).))))........
Structure
-------a a a agu a c -C C Gua gu
gugg uc gug ca cucg uucagug ACUAAAAUA GGUAUAGCGG g a
|||| || ||| || |||| ||||||| ||||||||| |||||||||| | g
cauc ag cac gu gggc aagucaC UGAUUUUAU CCGUGUCGCc c u
uuuaaacg g a --- - - CA C -ag aa
Annotation confidence
Not enough data
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Genome context
QEOQ01000670.1: 1235666-1235724 []
Clustered miRNAs
6 other miRNAs are < 10 kb from bpl-mir-12958-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bpl-miR-12958-1-5p
| Accession | MIMAT0067019 |
| Description | Brachionus plicatilis bpl-miR-12958-1-5p mature miRNA |
| Sequence | 31 - CACUAAAAUACGGUAUAGCGGG - 52 |
| Evidence | not_experimental |
Mature bpl-miR-12958-1-3p
| Accession | MIMAT0067020 |
| Description | Brachionus plicatilis bpl-miR-12958-1-3p mature miRNA |
| Sequence | 67 - CGCUGUGCCCUAUUUUAGUACC - 88 |
| Evidence | not_experimental |
References
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