Accession
MI0043999
Description
Brachionus plicatilis
bpl-mir-12959-2 precursor miRNA
Sequence
guggaauuguggaaaaaggaaucugacuuuUACUGUUUUUUGAUAGCCUCGCGuuucagucucucagaucgCGAGACUAUGUCAAACAGUUAAaguuggaaaaucugugaacaacuuguguca
......((((.......(((.(((((((((.(((((((....((((.((((((.....((((...)))))))))).))))...))))))).)))))))))...)))....)))).........
......((((.......(((.(((((((((.(((((((....((((.((((((.....((((...)))))))))).))))...))))))).)))))))))...)))....)))).........
Structure
---guggaa ggaaaaa --a U UUUG C uuuca c
uugu gga ucugacuuu ACUGUUU AUAG CUCGCG gucu
|||| ||| ||||||||| ||||||| |||| |||||| |||| u
aaca ucu agguugaAA UGACAAA UAUC GAGCgc uaga
acuguguuc ---agug aaa U -CUG A ----- c
Annotation confidence
Not enough data
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Genome context
QEOQ01000670.1: 1235402-1235464 []
Clustered miRNAs
6 other miRNAs are < 10 kb from bpl-mir-12959-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bpl-miR-12959-5p
| Accession | MIMAT0067021 |
| Description | Brachionus plicatilis bpl-miR-12959-5p mature miRNA |
| Sequence | 31 - UACUGUUUUUUGAUAGCCUCGCG - 53 |
| Evidence | not_experimental |
Mature bpl-miR-12959-3p
| Accession | MIMAT0067022 |
| Description | Brachionus plicatilis bpl-miR-12959-3p mature miRNA |
| Sequence | 72 - CGAGACUAUGUCAAACAGUUAA - 93 |
| Evidence | not_experimental |
References
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