Accession
MI0044000
Description
Brachionus plicatilis
bpl-mir-12959-1 precursor miRNA
Sequence
guggaauuguggaaaaaggaaucugacuuuUACUGUUUUUUGAUAGCCUCGCGuuucagucucucagaucgCGAGACUAUGUCAAACAGUUAAaguuggaaaaucugugaacaacuaguguca
.(((.(((((.......(((.(((((((((.(((((((....((((.((((((.....((((...)))))))))).))))...))))))).)))))))))...))).......)).))).)))
.(((.(((((.......(((.(((((((((.(((((((....((((.((((((.....((((...)))))))))).))))...))))))).)))))))))...))).......)).))).)))
Structure
g a - ggaaaaa --a U UUUG C uuuca c ugg auu gu gga ucugacuuu ACUGUUU AUAG CUCGCG gucu ||| ||| || ||| ||||||||| ||||||| |||| |||||| |||| u acu uga ca ucu agguugaAA UGACAAA UAUC GAGCgc uaga - g u acaagug aaa U -CUG A ----- c
Annotation confidence
Not enough data
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Genome context
QEOQ01000670.1: 1230041-1230103 []
Clustered miRNAs
6 other miRNAs are < 10 kb from bpl-mir-12959-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bpl-miR-12959-5p
| Accession | MIMAT0067021 |
| Description | Brachionus plicatilis bpl-miR-12959-5p mature miRNA |
| Sequence | 31 - UACUGUUUUUUGAUAGCCUCGCG - 53 |
| Evidence | not_experimental |
Mature bpl-miR-12959-3p
| Accession | MIMAT0067022 |
| Description | Brachionus plicatilis bpl-miR-12959-3p mature miRNA |
| Sequence | 72 - CGAGACUAUGUCAAACAGUUAA - 93 |
| Evidence | not_experimental |
References
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