Accession
MI0044004
Description
Brachionus plicatilis
bpl-mir-12960-1 precursor miRNA
Sequence
aucaucaacauuagcagugucacgagauagAACUGUUUAUAAAUAGCCUCGCuuguuagagaagcauuuauguGAGGGUAUUUCUAAGCAGUAAUuguucggacaucuauucaucaacccaaguc
...........(((..(((((.((((.....((((((((.(((((.((((((...................)))))).))))).)))))))).....))))))))))))................
...........(((..(((((.((((.....((((((((.(((((.((((((...................)))))).))))).)))))))).....))))))))))))................
Structure
-----aucaucaacau ca a auagA U G uuguuaga
uag guguc cgag ACUGUUUA AAAUA CCUCGC g
||| ||||| |||| |||||||| ||||| |||||| a
auc uacag gcuu UGACGAAU UUUAU GGAGug a
cugaacccaacuacuu -- - guUAA C G uauuuacg
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
QEOQ01000670.1: 1235786-1235850 []
Clustered miRNAs
6 other miRNAs are < 10 kb from bpl-mir-12960-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bpl-miR-12960-5p
| Accession | MIMAT0067025 |
| Description | Brachionus plicatilis bpl-miR-12960-5p mature miRNA |
| Sequence | 31 - AACUGUUUAUAAAUAGCCUCGC - 52 |
| Evidence | not_experimental |
Mature bpl-miR-12960-3p
| Accession | MIMAT0067026 |
| Description | Brachionus plicatilis bpl-miR-12960-3p mature miRNA |
| Sequence | 74 - GAGGGUAUUUCUAAGCAGUAAU - 95 |
| Evidence | not_experimental |
References
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