Accession
MI0044012
Description
Brachionus plicatilis
bpl-mir-12963 precursor miRNA
Sequence
cgaauuuuuuuaaaauucggauccuagccaAGGUGAAGUAGUAAAUCUCUUCUUGCUAAUCaauaugauaaaaucaucaugaUGAGAUUCAACUAACUUCACUUGAauuagguccgauuguuucaacauaaaagau
.....((((((((((((((((.(((((...((((((((((((.((((((.........((((..(((((...)))))..))))))))))..))).)))))))))...))))))))))..)))).....))))))).
.....((((((((((((((((.(((((...((((((((((((.((((((.........((((..(((((...)))))..))))))))))..))).)))))))))...))))))))))..)))).....))))))).
Structure
cgaau ----- -- u cca - -A UUCUUGCUA au a
uuuuuua aaau ucgga ccuag AGGUGAAGU AGU AAUCUC AUCa augau
||||||| |||| ||||| ||||| ||||||||| ||| |||||| |||| ||||| a
agaaaau uuug agccu ggauu UUCACUUCA UCA UUAGAG Uagu uacua
----u acaac uu - aAG A AC --------- ac a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
QEOQ01000670.1: 513697-513772 []
Clustered miRNAs
1 other miRNA is < 10 kb from bpl-mir-12963
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bpl-miR-12963-5p
| Accession | MIMAT0067042 |
| Description | Brachionus plicatilis bpl-miR-12963-5p mature miRNA |
| Sequence | 31 - AGGUGAAGUAGUAAAUCUCUUCUUGCUAAUC - 61 |
| Evidence | not_experimental |
Mature bpl-miR-12963-3p
| Accession | MIMAT0067041 |
| Description | Brachionus plicatilis bpl-miR-12963-3p mature miRNA |
| Sequence | 83 - UGAGAUUCAACUAACUUCACUUGA - 106 |
| Evidence | not_experimental |
References
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