Stem-loop bpl-mir-12971

Accession

MI0044031

Description

Brachionus plicatilis bpl-mir-12971 precursor miRNA

Sequence

ucaaaugaaugaauaggcgcauugauuaguGUCGAGUGAUGACCCAGGUUAUGacgagauaucaUCACCGGGUCUACACUUGCCACuaaucucgcuuucaauagcauccaacgcag
.........((((..((((....((((((((.((((((..(((((.(((.((((.......)))).))))))))..)))))).)))))))).))))))))...((.......))..

Structure

-------ucaaaugaa    ua    cauu        U      AU     A   U    cg 
                ugaa  ggcg    gauuaguG CGAGUG  GACCC GGU AUGa  a
                ||||  ||||    |||||||| ||||||  ||||| ||| ||||  g
                acuu  ucgc    cuaauCAC GUUCAC  CUGGG CCA Uacu  a
gacgcaaccuacgaua    --    ---u        C      AU     -   C    au 

Annotation confidence Not enough data

Genome context

QEOQ01000180.1: 141578-141633 []

Clustered miRNAs

1 other miRNA is < 10 kb from bpl-mir-12971

Mature bpl-miR-12971-5p

• Accession: MIMAT0067080
• Description: Brachionus plicatilis bpl-miR-12971-5p mature miRNA
• Sequence: 31 - GUCGAGUGAUGACCCAGGUUAUG - 53
• Evidence: not_experimental

Mature bpl-miR-12971-3p

• Accession: MIMAT0067079
• Description: Brachionus plicatilis bpl-miR-12971-3p mature miRNA
• Sequence: 65 - UCACCGGGUCUACACUUGCCAC - 86
• Evidence: not_experimental

References