Accession
MI0044038
Description
Brachionus plicatilis
bpl-mir-100 precursor miRNA
Sequence
gcuuuauuuuuuaaaaucguuuuaaaaguuCACCCGUAAUUCCGAACUUGAGUgggauacuaaaauggcuauuaaacauuuaaauacaaaaaauaaagacCUGAGUUUGUAAUAUACGGGUAAAcuuuuagaucacguauaaaaucaccgccac
((......(((((....(((((((((((((.((((((((((.((((((((.((((....)).(((((.........))))).................)).)))))))).))).))))))).))))))))))..)))..))))).....))...
((......(((((....(((((((((((((.((((((((((.((((((((.((((....)).(((((.........))))).................)).)))))))).))).))))))).))))))))))..)))..))))).....))...
Structure
--- uuuauu aaau -- C - C A --------gggauacua gcu gc uuuua cgu uuuaaaaguu ACCCGUA AUU CGAACUUG GU aaaug a || ||||| ||| |||||||||| ||||||| ||| |||||||| || ||||| u cg aaaau gca agauuuucAA UGGGCAU UAA GUUUGAGU ca uuuac u cac -ccacu --au cu A A U C gaaauaaaaaacauaaa aaa
Annotation confidence
Not enough data
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Genome context
QEOQ01000206.1: 734853-734946 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from bpl-mir-100
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bpl-miR-100-5p
| Accession | MIMAT0067093 |
| Description | Brachionus plicatilis bpl-miR-100-5p mature miRNA |
| Sequence | 31 - CACCCGUAAUUCCGAACUUGAGU - 53 |
| Evidence | not_experimental |
Mature bpl-miR-100-3p
| Accession | MIMAT0067094 |
| Description | Brachionus plicatilis bpl-miR-100-3p mature miRNA |
| Sequence | 101 - CUGAGUUUGUAAUAUACGGGUAAA - 124 |
| Evidence | not_experimental |
References
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