Accession
MI0044045
Description
Brachionus plicatilis
bpl-let-7 precursor miRNA
Sequence
cgucacagcaacuaaauagagauuuuugucUGAGGUAGUUGGUUGUAUGGUUuagaauuggaaucaauacuuguucccgaacuggugcagccaaggccuauccaaaugauucgccucuggaugaccgaaccauuggucaucacugguccggaauaaaacucaagcuaaCCAUACAACUUUCUAGCUUAAAugaacuucuuguuuuaucaucucaauucaa
............((((..((((..(((((.((((.(((..((((((((((((.((.((((....))))..(((((((.((.((((((...(((((((..(((.....)))..)))).)))((((((((....)))))))))))))))).)))))))........))))))))))))))..))).)))).)))))..))))..))))..............
............((((..((((..(((((.((((.(((..((((((((((((.((.((((....))))..(((((((.((.((((((...(((((((..(((.....)))..)))).)))((((((((....)))))))))))))))).)))))))........))))))))))))))..))).)))).)))))..))))..))))..............
Structure
--cgucacagcaac ua uu c G UU u aauuggaaucaauac c a -----------------cag - cu c
uaaa gaga uuugu UGAG UAG GGUUGUAUGGUU ag uuguucc ga cuggug cca aggc auc a
|||| |||| ||||| |||| ||| |||||||||||| || ||||||| || |||||| ||| |||| ||| a
auuu uucu aaguA AUUC AUC UCAACAUACCaa uc aauaagg cu ggucac ggu uccg uag a
aacuuaacucuacu ug uc A G UU - -------gaacucaa c - uacugguuaccaagccagua c cu u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
QEOQ01000206.1: 735008-735167 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from bpl-let-7
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bpl-let-7-5p
| Accession | MIMAT0067107 |
| Description | Brachionus plicatilis bpl-let-7-5p mature miRNA |
| Sequence | 31 - UGAGGUAGUUGGUUGUAUGGUU - 52 |
| Evidence | not_experimental |
Mature bpl-let-7-3p
| Accession | MIMAT0067108 |
| Description | Brachionus plicatilis bpl-let-7-3p mature miRNA |
| Sequence | 169 - CCAUACAACUUUCUAGCUUAAA - 190 |
| Evidence | not_experimental |
References
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