Accession
MI0044322
Description
Magallana gigas
mgi-mir-2001 precursor miRNA
Sequence
ccuuuuugugacaucgauaauccuuccuuuUUUGUGACCGUUAUAAUGGGCAuaacgucuuaugaaugCUCGUUGUAUCGAUCAUCAAAAuggaggaauaugcacgacagagcacaaggu
...(((((((...((((((.((((.((.((((.((((.((.((((((((((((....((....)))))))))))))).)).)))).)))).)))))).)))...))).....))))))).
...(((((((...((((((.((((.((.((((.((((.((.((((((((((((....((....)))))))))))))).)).)))).)))).)))))).)))...))).....))))))).
Structure
ccu --aca --- a u u U C U aacg u uuuugug ucg aua uccu cc uuUU GUGA CG UAUAAUGGGCAu uc u ||||||| ||| ||| |||| || |||| |||| || |||||||||||| || ggaacac agc uau agga gg AAAA UACU GC AUGUUGCUCgua ag a --u gagac acg a - u C A U ---- u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold1366: 96730-96789 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mgi-mir-2001
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mgi-miR-2001-5p
| Accession | MIMAT0067640 |
| Description | Magallana gigas mgi-miR-2001-5p mature miRNA |
| Sequence | 31 - UUUGUGACCGUUAUAAUGGGCA - 52 |
| Evidence | not_experimental |
Mature mgi-miR-2001-3p
| Accession | MIMAT0067641 |
| Description | Magallana gigas mgi-miR-2001-3p mature miRNA |
| Sequence | 69 - CUCGUUGUAUCGAUCAUCAAAA - 90 |
| Evidence | not_experimental |
References
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