miRBase entry: mgi-mir-1994b

Stem-loop mgi-mir-1994b


Accession
MI0044323
Description
Magallana gigas mgi-mir-1994b precursor miRNA


Sequence


uaaaauugacaaaacauggcgacugcucucAGGGUGGUAAUGCUGCCUACAUGgugaggugacaacaUGAGACAGUGUGUCCUCCCUAAguuucagaucuaagccgaaugcugcugaag
.................((((((((..((.((((.((..((((((.((.((((.((......)).)))))).))))))..)).)))).))...))).))...)))..............

Structure
uaaaauugacaaaacau   ---  -   -cu  c    U  UA      C  A    g  ag 
                 ggc   ga cug   cu AGGG GG  AUGCUG CU CAUG ug  g
                 |||   || |||   || |||| ||  |||||| || |||| ||   
                 ccg   cu gac   gA UCCC CC  UGUGAC GA GUac ac  u
---gaagucgucguaag   aau  a   uuu  A    U  UG      A  -    a  ag 


Annotation confidence Not enough data
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Genome context
scaffold950: 63808-63866 []
Clustered miRNAs
1 other miRNA is < 10 kb from mgi-mir-1994b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mgi-miR-1994b-5p

Accession MIMAT0067643
Description Magallana gigas mgi-miR-1994b-5p mature miRNA
Sequence 31 - AGGGUGGUAAUGCUGCCUACAUG - 53
Evidence not_experimental

Mature mgi-miR-1994b-3p

Accession MIMAT0067642
Description Magallana gigas mgi-miR-1994b-3p mature miRNA
Sequence 68 - UGAGACAGUGUGUCCUCCCUAA - 89
Evidence not_experimental

References