Accession
MI0044332
Description
Magallana gigas
mgi-mir-1175 precursor miRNA
Sequence
aauguauggaagaggaagggguguauuuggAGUGGAGAGAGUUUUAUCUCAUCguaaauugccgggUGAGAUUCAACUCCUCCAACUGCacacuacgccaacuugcagcacauggacuu
..(.((((.....(.(((.((((((..((.(((((((.(((((..((((((((...........))))))))..))))))))).))).))...))))))..))).)....)))).)...
..(.((((.....(.(((.((((((..((.(((((((.(((((..((((((((...........))))))))..))))))))).))).))...))))))..))).)....)))).)...
Structure
-aa g gaaga g -g -uu g - A UU guaa u uaug g aag ggugua ug AGU GGAG GAGUU AUCUCAUC a | |||| | ||| |||||| || ||| |||| ||||| |||||||| u a guac c uuc ccgcau aC UCA CCUC CUCAA UAGAGUgg u uuc g -acga g aa cac G A - CU gccg
Annotation confidence
Not enough data
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Genome context
scaffold514: 99890-99948 []
Clustered miRNAs
1 other miRNA is < 10 kb from mgi-mir-1175
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mgi-miR-1175-5p
| Accession | MIMAT0067661 |
| Description | Magallana gigas mgi-miR-1175-5p mature miRNA |
| Sequence | 31 - AGUGGAGAGAGUUUUAUCUCAUC - 53 |
| Evidence | not_experimental |
Mature mgi-miR-1175-3p
| Accession | MIMAT0067660 |
| Description | Magallana gigas mgi-miR-1175-3p mature miRNA |
| Sequence | 67 - UGAGAUUCAACUCCUCCAACUGC - 89 |
| Evidence | not_experimental |
References
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