miRBase entry: mgi-mir-13020

Stem-loop mgi-mir-13020


Accession
MI0044334
Description
Magallana gigas mgi-mir-13020 precursor miRNA


Sequence


uucaagaagaacaacucuugcagacaggucACGUGCGCUGUAUGUAACAACACgagacacaaacguUUUGUUCAGUCAGCUCGCGUUAuugagucuacucauacaucacugaaucuau
..(((((........))))).((((.(((.(((((.((((..((.(((((.(((.........))).)))))))..)))).))))).)))..))))......................

Structure
-uucaagaagaacaacucuugc    -a   c     C    UA  U     C   aga 
                      agac  ggu ACGUG GCUG  UG AACAA ACg   c
                      ||||  ||| ||||| ||||  || ||||| |||   a
                      ucug  uuA UGCGC CGAC  AC UUGUU ugc   c
uaucuaagucacuacauacuca    ag   U     U    UG  -     U   aaa 


Annotation confidence Not enough data
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Genome context
scaffold527: 290181-290238 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mgi-mir-13020
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mgi-miR-13020-5p

Accession MIMAT0067665
Description Magallana gigas mgi-miR-13020-5p mature miRNA
Sequence 31 - ACGUGCGCUGUAUGUAACAACAC - 53
Evidence not_experimental

Mature mgi-miR-13020-3p

Accession MIMAT0067664
Description Magallana gigas mgi-miR-13020-3p mature miRNA
Sequence 67 - UUUGUUCAGUCAGCUCGCGUUA - 88
Evidence not_experimental

References