miRBase entry: mgi-mir-216b

Stem-loop mgi-mir-216b


Accession
MI0044347
Description
Magallana gigas mgi-mir-216b precursor miRNA


Sequence


uucucuugccugauccugaugauguuugccUAAUCUCAGCUGGUAAUUCUGAGuugagcaagaccuCAAGUUACUAGCCGAGAUUACAcaagugucuccagugccuucacacuaaccc
..........(((.((((..((((((((..(((((((.((((((((((.((((((......)).)))))))))))))).)))))))..))))))))..))).)...))).........

Structure
uucucuugcc   --u -   au        cc       A          C    -  ga 
          uga   c cug  gauguuug  UAAUCUC GCUGGUAAUU UGAG uu  g
          |||   | |||  ||||||||  ||||||| |||||||||| |||| ||   
          acu   g gac  cugugaac  AUUAGAG CGAUCAUUGA ACuc ag  c
-cccaaucac   ucc u   cu        AC       C          -    c  aa 


Annotation confidence Not enough data
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Genome context
scaffold1785: 68810-68867 []
Clustered miRNAs
2 other miRNAs are < 10 kb from mgi-mir-216b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mgi-miR-216b-5p

Accession MIMAT0067690
Description Magallana gigas mgi-miR-216b-5p mature miRNA
Sequence 31 - UAAUCUCAGCUGGUAAUUCUGAG - 53
Evidence not_experimental

Mature mgi-miR-216b-3p

Accession MIMAT0067691
Description Magallana gigas mgi-miR-216b-3p mature miRNA
Sequence 67 - CAAGUUACUAGCCGAGAUUACA - 88
Evidence not_experimental

References