Accession
MI0044367
Description
Magallana gigas
mgi-mir-12978c-1 precursor miRNA
Sequence
guacauauaacaaaaaaacuggaugcguuuCCAUGUCACACAUUCGUCACAGUgucauucaaacacUGGACGGAAGUCUGAUAAGGGAuugcuaagcgaacuucuucaugaugucaag
........................(((.((((.(((((.((.((((((.((((((.......)))))))))))).)).))))).)))).))).......((.((.....)).))....
........................(((.((((.(((((.((.((((((.((((((.......)))))))))))).)).))))).)))).))).......((.((.....)).))....
Structure
--guacauauaacaaaaaaacuggau u A C A A ca
gcg uuCC UGUCA AC UUCGUC CAGUgu u
||| |||| ||||| || |||||| |||||| u
cgu AGGG AUAGU UG AGGCAG GUcaca c
gaacuguaguacuucuucaagcgaau u A C A - aa
Annotation confidence
Not enough data
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Genome context
scaffold121: 719297-719354 []
Clustered miRNAs
27 other miRNAs are < 10 kb from mgi-mir-12978c-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mgi-miR-12978c-1-5p
| Accession | MIMAT0067715 |
| Description | Magallana gigas mgi-miR-12978c-1-5p mature miRNA |
| Sequence | 31 - CCAUGUCACACAUUCGUCACAGU - 53 |
| Evidence | not_experimental |
Mature mgi-miR-12978c-3p
| Accession | MIMAT0067713 |
| Description | Magallana gigas mgi-miR-12978c-3p mature miRNA |
| Sequence | 67 - UGGACGGAAGUCUGAUAAGGGA - 88 |
| Evidence | not_experimental |
References
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