Accession
MI0044387
Description
Magallana gigas
mgi-mir-12978b-1 precursor miRNA
Sequence
cacagauaauaaauacaaccuguugcguuuCCUUGUCACACAUUCGUCACAGUGacauucaaacaCUGGACGGAAUCUGAUAAGGGAuugcuaagcgaacuucuuuaugaugucaag
....(((((((((.......(((((((.((((((((((....((((((.(((((.........)))))))))))...)))))))))).)))..))))......)))))..))))...
....(((((((((.......(((((((.((((((((((....((((((.(((((.........)))))))))))...)))))))))).)))..))))......)))))..))))...
Structure
caca -- uacaacc -- u CACA A aca
gaua auaaa uguu gcg uuCCUUGUCA UUCGUC CAGUG u
|||| ||||| |||| ||| |||||||||| |||||| ||||| u
cugu uauuu gcga cgu AGGGAAUAGU AGGCAG GUCac c
-gaa ag -cuucaa au u -CUA - aaa
Annotation confidence
Not enough data
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Genome context
scaffold121: 718786-718842 []
Clustered miRNAs
27 other miRNAs are < 10 kb from mgi-mir-12978b-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mgi-miR-12978b-1-5p
| Accession | MIMAT0067720 |
| Description | Magallana gigas mgi-miR-12978b-1-5p mature miRNA |
| Sequence | 31 - CCUUGUCACACAUUCGUCACAGUG - 54 |
| Evidence | not_experimental |
Mature mgi-miR-12978b-1-3p
| Accession | MIMAT0067721 |
| Description | Magallana gigas mgi-miR-12978b-1-3p mature miRNA |
| Sequence | 66 - CUGGACGGAAUCUGAUAAGGGA - 87 |
| Evidence | not_experimental |
References
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