miRBase entry: mgi-mir-12978b-6

Stem-loop mgi-mir-12978b-6


Accession
MI0044392
Description
Magallana gigas mgi-mir-12978b-6 precursor miRNA


Sequence


cacagauaacaaauacaacuuguugcauuuCCUUGUCACACAUUCGUCACAGUgucauucaaacacUGGACGGAGGUCUGAUAAGGGAucgccaagggaacuuuuucacaaugucauc
..................((((..((..((((((((((.((.((((((.((((((.......)))))))))))).)).))))))))))..))))))......................

Structure
----cacagauaacaaauacaa    uu  au          C  A      A      ca 
                      cuug  gc  uuCCUUGUCA AC UUCGUC CAGUgu  u
                      ||||  ||  |||||||||| || |||||| ||||||  u
                      gaac  cg  AGGGAAUAGU UG AGGCAG GUcaca  c
cuacuguaacacuuuuucaagg    --  cu          C  G      -      aa 


Annotation confidence Not enough data
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Genome context
scaffold121: 721728-721785 []
Clustered miRNAs
27 other miRNAs are < 10 kb from mgi-mir-12978b-6
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mgi-miR-12978b-5p

Accession MIMAT0067719
Description Magallana gigas mgi-miR-12978b-5p mature miRNA
Sequence 31 - CCUUGUCACACAUUCGUCACAGU - 53
Evidence not_experimental

Mature mgi-miR-12978b-3p

Accession MIMAT0067717
Description Magallana gigas mgi-miR-12978b-3p mature miRNA
Sequence 67 - UGGACGGAGGUCUGAUAAGGGA - 88
Evidence not_experimental

References