miRBase entry: mgi-mir-263a

Stem-loop mgi-mir-263a


Accession
MI0044401
Description
Magallana gigas mgi-mir-263a precursor miRNA


Sequence


acugagaguugggguuaaaagcgugcagauCUUGGCACUUGUAGAAUUCACUGAuacuugaauauuuaaucucAGUGAAUCUAUAGUGGCAACCGcggcacgcuacucugaacaucgugggagca
.(((.((((((((((....(((((((.(...(((.((((.(((((.((((((((...((((....))))..))))))))))))))))).)))...).)))))))))))).))).)).))).....

Structure
----a   a  -   -     uaaa       a auC   G    U     A        uac    a 
     cug ga guu ggggu    agcgugc g   UUG CACU GUAGA UUCACUGA   uuga u
     ||| || ||| |||||    ||||||| |   ||| |||| ||||| ||||||||   ||||  
     ggu cu caa ucuca    ucgcacg c   AAC GUGA UAUCU AAGUGAcu   aauu a
acgag   g  a   g     ----       g GCC   G    -     -        -cu    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold626: 26567-26631 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mgi-mir-263a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mgi-miR-263a-5p

Accession MIMAT0067744
Description Magallana gigas mgi-miR-263a-5p mature miRNA
Sequence 31 - CUUGGCACUUGUAGAAUUCACUGA - 54
Evidence not_experimental

Mature mgi-miR-263a-3p

Accession MIMAT0067745
Description Magallana gigas mgi-miR-263a-3p mature miRNA
Sequence 74 - AGUGAAUCUAUAGUGGCAACCG - 95
Evidence not_experimental

References