miRBase entry: mgi-mir-92d

Stem-loop mgi-mir-92d


Accession
MI0044404
Description
Magallana gigas mgi-mir-92d precursor miRNA


Sequence


ggugcgggggaguagauugugauuacguuaCGGCGGGGACCAGGGCAAUAUGGuguaacacaaauccAAUUGCACAAGUCCCGGCCUGCccgugaauugcacgucuucaggggauuucg
........(((((.....(((((...)))))(((.(((((....(((((.(((............))))))))....))))).)))..(((.((((.........)))).)))))))).

Structure
ggugcggg     ---------agauugugauuacguuaC   G     CAGG     A   uguaa 
        ggagu                           GGC GGGAC    GCAAU UGG     c
        |||||                           ||| |||||    ||||| |||      
        cuuua                           CCG CCCUG    CGUUA Acc     a
-------g     ggggacuucugcacguuaagugccCGU   G     AACA     -   uaaac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold459: 310883-310941 []
Clustered miRNAs
2 other miRNAs are < 10 kb from mgi-mir-92d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mgi-miR-92d-5p

Accession MIMAT0067751
Description Magallana gigas mgi-miR-92d-5p mature miRNA
Sequence 31 - CGGCGGGGACCAGGGCAAUAUGG - 53
Evidence not_experimental

Mature mgi-miR-92d-3p

Accession MIMAT0067750
Description Magallana gigas mgi-miR-92d-3p mature miRNA
Sequence 68 - AAUUGCACAAGUCCCGGCCUGC - 89
Evidence not_experimental

References