miRBase entry: mgi-mir-92c

Stem-loop mgi-mir-92c


Accession
MI0044405
Description
Magallana gigas mgi-mir-92c precursor miRNA


Sequence


guuuagagauauuagaaagucaugcaauguAGGCUGUGAAAGGUAGCAAUCAUUUCAugacguuuacgugAAUUGCACCUGUCCCGGCCUGCacuggaugucgauuacaacggagacccgga
..................(.(((.((.(((((((((.((.((((.(((((....(((((.......)))))))))))))).)).))))))))).)).))).)........(((....)))..

Structure
--guuuagagauauuagaaa u   g  a         U  A    A     CAUU     ac 
                    g cau ca uguAGGCUG GA AGGU GCAAU    UCAug  g
                    | ||| || ||||||||| || |||| |||||    |||||  u
                    c gua gu aCGUCCGGC CU UCCA CGUUA    Agugc  u
aggcccagaggcaacauuag u   g  c         C  G    -     ----     au 


Annotation confidence Not enough data
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Genome context
scaffold459: 311201-311262 []
Clustered miRNAs
2 other miRNAs are < 10 kb from mgi-mir-92c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mgi-miR-92c-5p

Accession MIMAT0067753
Description Magallana gigas mgi-miR-92c-5p mature miRNA
Sequence 31 - AGGCUGUGAAAGGUAGCAAUCAUUUCA - 57
Evidence not_experimental

Mature mgi-miR-92c-3p

Accession MIMAT0067752
Description Magallana gigas mgi-miR-92c-3p mature miRNA
Sequence 71 - AAUUGCACCUGUCCCGGCCUGC - 92
Evidence not_experimental

References