Stem-loop mgi-mir-29b

Accession

MI0044420

Description

Magallana gigas mgi-mir-29b precursor miRNA

Sequence

uccauggaaaugagaaucugcuguaggucCCUGGUUUCAAGUGGUGAAUAGAuuuuggagugaaaauacugucUAGCACCAUUUGAAAUCAGUGCaucuuuuaguggaaugacaaagcauggauu
((((((....((..(.(((((((.((((.(((((((((((((((((..(((((.....((((....))))))))).)))))))))))))))).).))))..))))))).)..))...))))))..

Structure

--      gaaa  ag a       -u    c -                AA     uuugg    a 
  uccaug    ug  a ucugcug  aggu C CUGGUUUCAAGUGGUG  UAGAu     agug a
  ||||||    ||  | |||||||  |||| | ||||||||||||||||  |||||     ||||  
  agguac    ac  u aggugau  ucua G GACUAAAGUUUACCAC  AUcug     ucau a
uu      -gaa  ag a       uu    C U                -G     -----    a 

Annotation confidence Not enough data

Genome context

scaffold145: 184799-184863 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mgi-mir-29b

Mature mgi-miR-29b-5p

• Accession: MIMAT0067783
• Description: Magallana gigas mgi-miR-29b-5p mature miRNA
• Sequence: 30 - CCUGGUUUCAAGUGGUGAAUAGA - 52
• Evidence: not_experimental

Mature mgi-miR-29b-3p

• Accession: MIMAT0067782
• Description: Magallana gigas mgi-miR-29b-3p mature miRNA
• Sequence: 74 - UAGCACCAUUUGAAAUCAGUGC - 95
• Evidence: not_experimental

References