Stem-loop mgi-mir-100

Accession

MI0044427

Description

Magallana gigas mgi-mir-100 precursor miRNA

Sequence

agugugccagucaucaggcagggcaacaggAACCCGUAGAUCCGAACUUGUGugggcaauucuCAAGCUCAGAUCUAGGGGUCUGugucgucucugcaguagucaacaagccaga
..((.((..((......(((((((.(((.(.((((.((((((.((.((((.(.........).)))).)).)))))).)))).).))).))).))))........))..))))..

Structure

ag  u  ca  --caucag    -   a   g A    G      C  A    U ugg 
  ug gc  gu        gcag ggc aca g ACCC UAGAUC GA CUUG G   g
  || ||  ||        |||| ||| ||| | |||| |||||| || |||| |   c
  ac cg  ca        cguc cug ugu U UGGG AUCUAG CU GAAC c   a
ag  -  aa  acugauga    u   c   G C    G      A  C    u uua 

Annotation confidence Not enough data

Genome context

scaffold43364: 47989-48043 []

Clustered miRNAs

2 other miRNAs are < 10 kb from mgi-mir-100

Mature mgi-miR-100-5p

• Accession: MIMAT0067796
• Description: Magallana gigas mgi-miR-100-5p mature miRNA
• Sequence: 31 - AACCCGUAGAUCCGAACUUGUG - 52
• Evidence: not_experimental

Mature mgi-miR-100-3p

• Accession: MIMAT0067797
• Description: Magallana gigas mgi-miR-100-3p mature miRNA
• Sequence: 64 - CAAGCUCAGAUCUAGGGGUCUG - 85
• Evidence: not_experimental

References