Stem-loop mgi-mir-13028

Accession

MI0044430

Description

Magallana gigas mgi-mir-13028 precursor miRNA

Sequence

cguugaacagcguggaguucgcucguuaugUCUUUGGUUGCUUGGCUGUAUGAuugaguuugcaagaucAUAAAGCUAUGCUACCGGAGGCUuaaauggcgacuuagacugccucugaaacu
.(((...(((.(.(.((((((((..(((.(((((((((.((.(((((.(((((((..(....)..))))))).))))).)).))))))))).)))..))))).....))).)).))).))).

Structure

c   gaa   c u g   -----     cg   u         U  U     G       ga u 
 guu   cag g g agu     ucgcu  uua gUCUUUGGU GC UGGCU UAUGAuu  g u
 |||   ||| | | |||     |||||  ||| ||||||||| || ||||| |||||||  |  
 caa   guc c c uca     agcgg  aau CGGAGGCCA CG AUCGA AUAcuag  c u
u   --a   u - g   gauuc     ua   U         U  U     A       aa g 

Annotation confidence Not enough data

Genome context

scaffold42448: 84463-84524 []

Clustered miRNAs

2 other miRNAs are < 10 kb from mgi-mir-13028

Mature mgi-miR-13028-5p

• Accession: MIMAT0067802
• Description: Magallana gigas mgi-miR-13028-5p mature miRNA
• Sequence: 31 - UCUUUGGUUGCUUGGCUGUAUGA - 53
• Evidence: not_experimental

Mature mgi-miR-13028-3p

• Accession: MIMAT0067803
• Description: Magallana gigas mgi-miR-13028-3p mature miRNA
• Sequence: 70 - AUAAAGCUAUGCUACCGGAGGCU - 92
• Evidence: not_experimental

References