miRBase entry: mgi-mir-2f

Stem-loop mgi-mir-2f


Accession
MI0044436
Description
Magallana gigas mgi-mir-2f precursor miRNA


Sequence


uauugucaaugaguacugauugcauggcuaGCAUUGAAGUGGCAGUGAUGUGcugauguacugucaUAUCACAGCCAGCUUUGAUGACAggcaaguaaucuucacagcuaaauagucaa
............((...((((((.((.((..((((((((((((.(((((((((.........).)))))))).)))).))))))))..)).)).))))))...))..............

Structure
--uauugucaauga  acu      a  g  aG        -    A        - uga 
              gu   gauugc ug cu  CAUUGAAG UGGC GUGAUGUG c   u
              ||   |||||| || ||  |||||||| |||| |||||||| |   g
              ca   cuaaug ac gA  GUAGUUUC ACCG CACUAUac g   u
aacugauaaaucga  cuu      a  g  CA        G    A        u uca 


Annotation confidence Not enough data
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Genome context
scaffold602: 446534-446592 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from mgi-mir-2f
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mgi-miR-2f-5p

Accession MIMAT0067815
Description Magallana gigas mgi-miR-2f-5p mature miRNA
Sequence 31 - GCAUUGAAGUGGCAGUGAUGUG - 52
Evidence not_experimental

Mature mgi-miR-2f-3p

Accession MIMAT0067814
Description Magallana gigas mgi-miR-2f-3p mature miRNA
Sequence 67 - UAUCACAGCCAGCUUUGAUGACA - 89
Evidence not_experimental

References