Accession
MI0044443
Description
Magallana gigas
mgi-mir-1 precursor miRNA
Sequence
ggacucacaagaaacaacuaugaucucgguCCAUACUUCUUUGCUAUCCCAUAuguacacccugaucaguuaUGGAAUGUAAAGAAGUAUGUAUccuugcucauggacaaacggcgaagcagcu
.................((((((.(..((..(((((((((((((.((.(((((.................))))).)))))))))))))))...))..).))))))......(((......)))
.................((((((.(..((..(((((((((((((.((.(((((.................))))).)))))))))))))))...))..).))))))......(((......)))
Structure
-ggacucacaagaaacaa u uc -uC U C uguacac
cuauga c gg CAUACUUCUUUGC AU CCAUA c
|||||| | || ||||||||||||| || ||||| c
gguacu g cc GUAUGAAGAAAUG UA GGUau u
ucgacgaagcggcaaaca c uu UAU - A ugacuag
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold1174: 365483-365546 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mgi-mir-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mgi-miR-1-5p
| Accession | MIMAT0067828 |
| Description | Magallana gigas mgi-miR-1-5p mature miRNA |
| Sequence | 31 - CCAUACUUCUUUGCUAUCCCAUA - 53 |
| Evidence | not_experimental |
Mature mgi-miR-1-3p
| Accession | MIMAT0067827 |
| Description | Magallana gigas mgi-miR-1-3p mature miRNA |
| Sequence | 73 - UGGAAUGUAAAGAAGUAUGUAU - 94 |
| Evidence | not_experimental |
References
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