miRBase entry: sro-mir-13045-1

Stem-loop sro-mir-13045-1


Accession
MI0044467
Description
Symsagittifera roscoffensis sro-mir-13045-1 precursor miRNA


Sequence


uggagcucauaucuaggacuuugagcuuauCAGGCCUGUUUUGUGUAUGUAUUcuacaauugaaacuuaaacuuugugaaUAUUGCACUUGGCUCGGCCUCAUagcucauugucacguauaguguaucuuaga
.(((...(((.....((((..((((((.((.(((((.(((..(((((.((((((.((((..............)))))))))))))))..)))..))))).))))))))..))).).....)))..)))....

Structure
---u   gcu   aucua -   uu      u  C     -U   UU     U      u    uugaaa 
    gga   cau     g gac  ugagcu au AGGCC  GUU  GUGUA GUAUUc acaa      c
    |||   |||     | |||  |||||| || |||||  |||  ||||| |||||| ||||       
    ucu   gug     c cug  acucga UA UCCGG  CGG  CACGU UAUaag uguu      u
agau   -au   auaug a   uu      -  C     CU   UU     -      -    ucaaau 


Annotation confidence Not enough data
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Genome context
JANVAR010000529.1: 864175-864247 []
Clustered miRNAs
1 other miRNA is < 10 kb from sro-mir-13045-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sro-miR-13045-1-5p

Accession MIMAT0067875
Description Symsagittifera roscoffensis sro-miR-13045-1-5p mature miRNA
Sequence 31 - CAGGCCUGUUUUGUGUAUGUAUU - 53
Evidence not_experimental

Mature sro-miR-13045-3p

Accession MIMAT0067871
Description Symsagittifera roscoffensis sro-miR-13045-3p mature miRNA
Sequence 81 - UAUUGCACUUGGCUCGGCCUCAU - 103
Evidence not_experimental

References