miRBase entry: sro-mir-13052

Stem-loop sro-mir-13052


Accession
MI0044475
Description
Symsagittifera roscoffensis sro-mir-13052 precursor miRNA


Sequence


aaaaaaaaaaucaaaguuagaaucuuacgcCACCCUGUAAGAUGAGCGGGUUGaaauuauuucauaaaaaaugauacaaucaACCCGGUUUCUUACAGGGAUCGauaaaauucuaaucgcuucucacuuugaau
..........(((((((((((((.(((((...((((((((((.((.((((((((.(((((((......)))))))....)))))))).))))))))))))..)).))).))))))..........)))))))..

Structure
aaaaaaaaaa       ----------      c   -  cCA          U  G        ---a       ca 
          ucaaagu          uagaau uua cg   CCCUGUAAGA GA CGGGUUGa    auuauuu  u
          |||||||          |||||| ||| ||   |||||||||| || ||||||||    |||||||   
          aguuuca          aucuua aau GC   GGGACAUUCU UU GCCCAacu    uaguaaa  a
--------ua       cucuucgcua      a   a  -UA          -  G        aaca       aa 


Annotation confidence Not enough data
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Genome context
JANVAR010000364.1: 599067-599140 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sro-mir-13052
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sro-miR-13052-5p

Accession MIMAT0067889
Description Symsagittifera roscoffensis sro-miR-13052-5p mature miRNA
Sequence 31 - CACCCUGUAAGAUGAGCGGGUUG - 53
Evidence not_experimental

Mature sro-miR-13052-3p

Accession MIMAT0067890
Description Symsagittifera roscoffensis sro-miR-13052-3p mature miRNA
Sequence 83 - ACCCGGUUUCUUACAGGGAUCG - 104
Evidence not_experimental

References