miRBase entry: pve-mir-1990c

Stem-loop pve-mir-1990c


Accession
MI0044517
Description
Pictodentalium vernedei pve-mir-1990c precursor miRNA


Sequence


gcagcaacagagagggacgaucacguacgcUGUAAGUUGUAGGGGUCCCAGGuauauacagguucUGGGACUACUUCAACUACACGcggaaguguuuuuaaaaucuacaacuagggu
..........(((........(((...(((((((.((((.((.(((((((((...........))))))))).)).)))))))).)))...))).........)))...........

Structure
-gcagcaacag   -gggacgau   gua   -    A    U  G         uaua 
           aga         cac   cgc UGUA GUUG AG GGUCCCAGG    u
           |||         |||   ||| |||| |||| || |||||||||    a
           ucu         gug   gcG ACAU CAAC UC UCAGGGUcu    c
ugggaucaaca   aaaauuuuu   aag   C    -    U  A         ugga 


Annotation confidence Not enough data
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Genome context
Pve_Chr2: 352800222-352800278 []
Clustered miRNAs
5 other miRNAs are < 10 kb from pve-mir-1990c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pve-miR-1990c-5p

Accession MIMAT0067970
Description Pictodentalium vernedei pve-miR-1990c-5p mature miRNA
Sequence 31 - UGUAAGUUGUAGGGGUCCCAGG - 52
Evidence not_experimental

Mature pve-miR-1990c-3p

Accession MIMAT0067971
Description Pictodentalium vernedei pve-miR-1990c-3p mature miRNA
Sequence 66 - UGGGACUACUUCAACUACACG - 86
Evidence not_experimental

References