miRBase entry: pve-mir-46-4

Stem-loop pve-mir-46-4


Accession
MI0044533
Description
Pictodentalium vernedei pve-mir-46-4 precursor miRNA


Sequence


caacagaauuaagaaagggaucucgcaauaAAGGGAGCACCCGUCGACAGUcggauaaaaagcacUGUCAUGGAGUUGCUCUCUUCAugguggaggucaaacgucuucaguguuuca
.((((.....((((....((((((((.((.((((((((((((((.(((((((.........).)))))))))).).))))))))).)).)).)))))).....))))...))))...

Structure
--c    gaauu    -aagg      -  a  a         - -    C      - gga 
   aaca     aaga     gaucuc gc au AAGGGAGCA C CCGU GACAGU c   u
   ||||     ||||     |||||| || || ||||||||| | |||| |||||| |   a
   uugu     uucu     cuggag ug uA UUCUCUCGU G GGUA CUGUca g   a
acu    --gac    gcaaa      g  g  C         U A    -      c aaa 


Annotation confidence Not enough data
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Genome context
Pve_Chr2: 249376855-249376911 []
Clustered miRNAs
2 other miRNAs are < 10 kb from pve-mir-46-4
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pve-miR-46-5p

Accession MIMAT0068001
Description Pictodentalium vernedei pve-miR-46-5p mature miRNA
Sequence 31 - AAGGGAGCACCCGUCGACAGU - 51
Evidence not_experimental

Mature pve-miR-46-3p

Accession MIMAT0068000
Description Pictodentalium vernedei pve-miR-46-3p mature miRNA
Sequence 66 - UGUCAUGGAGUUGCUCUCUUCA - 87
Evidence not_experimental

References