miRBase entry: pve-mir-242

Stem-loop pve-mir-242


Accession
MI0044541
Description
Pictodentalium vernedei pve-mir-242 precursor miRNA


Sequence


augaacauaaagcacagguuuucgugugugUUGCGUAGGCAUUGUGCACAAUguuacgaacaagcuUGUGCAUAUCGCCUCCGCAGCCcgcaugaauaacucgaugcaccaggugaca
...........((((.((((((((((((.((((((.((((..(((((((((.(((.......))))))))))))..)))).)))))).)))))))).)))).).)))...........

Structure
augaacauaaa   - a    -        u      U    AU         U   ac 
           gca c gguu uucgugug gUUGCG AGGC  UGUGCACAA guu  g
           ||| | |||| |||||||| |||||| ||||  ||||||||| |||  a
           cgu g ucaa aaguacgc CGACGC UCCG  AUACGUGUu cga  a
acaguggacca   a c    u        C      C    CU         -   ac 


Annotation confidence Not enough data
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Genome context
Pve_Chr9: 281369414-281369471 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pve-mir-242
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pve-miR-242-5p

Accession MIMAT0068010
Description Pictodentalium vernedei pve-miR-242-5p mature miRNA
Sequence 31 - UUGCGUAGGCAUUGUGCACAAU - 52
Evidence not_experimental

Mature pve-miR-242-3p

Accession MIMAT0068011
Description Pictodentalium vernedei pve-miR-242-3p mature miRNA
Sequence 67 - UGUGCAUAUCGCCUCCGCAGCC - 88
Evidence not_experimental

References