miRBase entry: pve-mir-29b

Stem-loop pve-mir-29b


Accession
MI0044573
Description
Pictodentalium vernedei pve-mir-29b precursor miRNA


Sequence


ucagcugaaugcagaauauaacuugggggaGCUGCUCUCAUUUGGUGGAUAGAguaauuauuuucUAGCACCAUUUGAAAUCAGUUUuccacaguuuuugaucaucauugaaagagc
((((.(((...(((((....(((..(((((((((...(((..(((((..(((((........))))).)))))..)))...)))))))))..))))))))....)))))))......

Structure
------    c   -aug     uaua   ug         CUC   UU     GA     uaa 
      ucag uga    cagaa    acu  ggggaGCUG   UCA  UGGUG  UAGAg   u
      |||| |||    |||||    |||  |||||||||   |||  |||||  |||||    
      aguu acu    guuuu    uga  ccuUUUGAC   AGU  ACCAC  AUcuu   u
cgagaa    -   acua     ----   ca         UAA   UU     -G     uua 


Annotation confidence Not enough data
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Genome context
Pve_Chr9: 771278604-771278660 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pve-mir-29b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pve-miR-29b-5p

Accession MIMAT0068071
Description Pictodentalium vernedei pve-miR-29b-5p mature miRNA
Sequence 31 - GCUGCUCUCAUUUGGUGGAUAGA - 53
Evidence not_experimental

Mature pve-miR-29b-3p

Accession MIMAT0068070
Description Pictodentalium vernedei pve-miR-29b-3p mature miRNA
Sequence 66 - UAGCACCAUUUGAAAUCAGUUU - 87
Evidence not_experimental

References