Stem-loop pau-mir-35

Accession

MI0044643

Description

Phoronis australis pau-mir-35 precursor miRNA

Sequence

caagaaaagucgaugugucuaucguggccgGAUGAACGUUCGCCCUGGUGAUGuguuuugaaaucaUCACCGGGUAAACAUUCAUCCAuucucguagaccuuucagcgaucuacaaug
..(((...((.((...(((((.((.((..(((((((.(((.((((.(((((((...........))))))))))).))).)))))))..)).)))))))...)).))..)))......

Structure

----ca   aaa  c  ugu     u  u  cc       C   C    U       uguu 
      aga   gu ga   gucua cg gg  gGAUGAA GUU GCCC GGUGAUG    u
      |||   || ||   ||||| || ||  ||||||| ||| |||| |||||||    u
      ucu   cg cu   cagau gc cu  CCUACUU CAA UGGG CCACUac    g
guaaca   -ag  a  uuc     -  u  uA       A   A    -       uaaa 

Annotation confidence Not enough data

Genome context

NMRA01000011.1: 340936-340993 []

Clustered miRNAs

1 other miRNA is < 10 kb from pau-mir-35

Mature pau-miR-35-5p

• Accession: MIMAT0068208
• Description: Phoronis australis pau-miR-35-5p mature miRNA
• Sequence: 31 - GAUGAACGUUCGCCCUGGUGAUG - 53
• Evidence: not_experimental

Mature pau-miR-35-3p

• Accession: MIMAT0068207
• Description: Phoronis australis pau-miR-35-3p mature miRNA
• Sequence: 67 - UCACCGGGUAAACAUUCAUCCA - 88
• Evidence: not_experimental

References