Stem-loop pau-mir-100

Accession

MI0044654

Description

Phoronis australis pau-mir-100 precursor miRNA

Sequence

aggucuguaucuugcuaucuugcuaaagcaAACCCGUAGAUCCGAACUGGUGucuuuguaaaucaCAAGCUCGUAUCUAUGGGUCUGccgaggcauggcugucuucgauuuuuuuuc
.((((.(......((((...((((...(((.((((((((((.(((.((.(((...........))).)).))).)))))))))).)))...))))))))......))))).......

Structure

------a    u uaucuu    ucu    aaa   A          C   A  G   ucuu 
       gguc g      gcua   ugcu   gca ACCCGUAGAU CGA CU GUG    u
       |||| |      ||||   ||||   ||| |||||||||| ||| || |||    g
       uuag c      cggu   acgg   cGU UGGGUAUCUA GCU GA Cac    u
cuuuuuu    - uucugu    ---    agc   C          U   C  A   uaaa 

Annotation confidence Not enough data

Genome context

NMRA01000411.1: 310136-310192 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pau-mir-100

Mature pau-miR-100-5p

• Accession: MIMAT0068229
• Description: Phoronis australis pau-miR-100-5p mature miRNA
• Sequence: 31 - AACCCGUAGAUCCGAACUGGUG - 52
• Evidence: not_experimental

Mature pau-miR-100-3p

• Accession: MIMAT0068230
• Description: Phoronis australis pau-miR-100-3p mature miRNA
• Sequence: 66 - CAAGCUCGUAUCUAUGGGUCUG - 87
• Evidence: not_experimental

References