Stem-loop pau-mir-2c

Accession

MI0044662

Description

Phoronis australis pau-mir-2c precursor miRNA

Sequence

gaguggccaguuguugcgcgcuguagucggGUCGUUAAAGUGGCUGUGAUGUGcuaucacucaugacaUAUCACAGCCUGCUUUGACGAGUUgacaggcacgauuuauccucuugaccaaag
(((.((......((((.((.((...(((((.((((((((((((((((((((((.(((.....))).)))))))))))).)))))))))).))))))))).))))....)).)))........

Structure

--------   u  ccaguu    c  g  gua     G          -            c   c 
        gag gg      guug gc cu   gucgg UCGUUAAAGU GGCUGUGAUGUG uau a
        ||| ||      |||| || ||   ||||| |||||||||| |||||||||||| ||| c
        uuc cc      uagc cg ga   cagUU AGCAGUUUCG CCGACACUAUac gua u
gaaaccag   u  --uauu    a  -  ---     G          U            a   c 

Annotation confidence Not enough data

Genome context

NMRA01000510.1: 289683-289744 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from pau-mir-2c

Mature pau-miR-2c-5p

• Accession: MIMAT0068245
• Description: Phoronis australis pau-miR-2c-5p mature miRNA
• Sequence: 31 - GUCGUUAAAGUGGCUGUGAUGUG - 53
• Evidence: not_experimental

Mature pau-miR-2c-3p

• Accession: MIMAT0068244
• Description: Phoronis australis pau-miR-2c-3p mature miRNA
• Sequence: 69 - UAUCACAGCCUGCUUUGACGAGUU - 92
• Evidence: not_experimental

References