Stem-loop pau-mir-13080

Accession

MI0044663

Description

Phoronis australis pau-mir-13080 precursor miRNA

Sequence

guccuggugucgaggcuaucgguuacuugcCCGUUAUAGUGGCUGUGAUGUGugaacauugguucgUAUCACAGCCCAGCUAUGACGAGCugguggcuggacuauguccgcuagcaugac
(((.((.((.((.(((..(((((((((.((.(((((((((((((((((((..(((((....)))))))))))))))..))))))))).)).))))))))).....))))).)).)).)))

Structure

   c  g  u  a   ---ua         u  C         --          UG     a 
guc ug ug cg ggc     ucgguuacu gc CGUUAUAGU  GGCUGUGAUG  ugaac u
||| || || || |||     ||||||||| || |||||||||  ||||||||||  |||||  
cag ac au gc cug     ggucggugg CG GCAGUAUCG  CCGACACUAU  gcuug u
   u  g  c  -   uauca         u  A         AC          --     g 

Annotation confidence Not enough data

Genome context

NMRA01000510.1: 288743-288802 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from pau-mir-13080

Mature pau-miR-13080-5p

• Accession: MIMAT0068247
• Description: Phoronis australis pau-miR-13080-5p mature miRNA
• Sequence: 31 - CCGUUAUAGUGGCUGUGAUGUG - 52
• Evidence: not_experimental

Mature pau-miR-13080-3p

• Accession: MIMAT0068246
• Description: Phoronis australis pau-miR-13080-3p mature miRNA
• Sequence: 67 - UAUCACAGCCCAGCUAUGACGAGC - 90
• Evidence: not_experimental

References