miRBase entry: ofu-mir-216c

Stem-loop ofu-mir-216c


Accession
MI0044707
Description
Owenia fusiformis ofu-mir-216c precursor miRNA


Sequence


aaugagguuuuaaugcuuuuaaugagguuuUAAUCUCAGCUGGUAAUUCUGAgauugacuuuaacccucAGAUUCCCAGGCGAGAUUAUAcccuuguuauuacuaacgagccacccggga
.....(((((.........((((((((...(((((((..((((....((((((.............))))))...))))..)))))))...))))))))........)))))........

Structure
---aauga     uaaugcuuu        uuu       AG    UAAU      auuga 
        gguuu         uaaugagg   UAAUCUC  CUGG    UCUGAg     c
        |||||         ||||||||   |||||||  ||||    ||||||     u
        ccgag         auuguucc   AUUAGAG  GACC    AGAcuc     u
agggccca     -caaucauu        cAU       CG    -CUU      ccaau 


Annotation confidence Not enough data
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Genome context
CAIIXF020000008.1: 38331176-38331235 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from ofu-mir-216c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ofu-miR-216c-5p

Accession MIMAT0068331
Description Owenia fusiformis ofu-miR-216c-5p mature miRNA
Sequence 31 - UAAUCUCAGCUGGUAAUUCUGA - 52
Evidence not_experimental

Mature ofu-miR-216c-3p

Accession MIMAT0068332
Description Owenia fusiformis ofu-miR-216c-3p mature miRNA
Sequence 70 - AGAUUCCCAGGCGAGAUUAUA - 90
Evidence not_experimental

References