miRBase entry: ofu-mir-100

Stem-loop ofu-mir-100


Accession
MI0044751
Description
Owenia fusiformis ofu-mir-100 precursor miRNA


Sequence


agacucucgacucugaucccuguccacauaAACCCGUAGAUCCGAACUUGUGcugccaucuaucaCAAGCUCGACUCUAUGGGUCUGuguugucauggcaaccaucucagcuucaug
........((..((((.((.((.(.(((((.(((((((((..(((.((((((.((.....)).)))))).)))..))))))))).))))).).)).))........))))..))...

Structure
agacucuc  cu    -------u  c  u c     A         UC   A      c  c 
        ga  cuga        cc ug c acaua ACCCGUAGA  CGA CUUGUG ug c
        ||  ||||        || || | ||||| |||||||||  ||| |||||| || a
        cu  gacu        gg ac g uguGU UGGGUAUCU  GCU GAACac au u
-----gua  uc    cuaccaac  u  u u     C         CA   C      u  c 


Annotation confidence Not enough data
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Genome context
CAIIXF020000010.1: 10549377-10549433 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ofu-mir-100
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ofu-miR-100-5p

Accession MIMAT0068418
Description Owenia fusiformis ofu-miR-100-5p mature miRNA
Sequence 31 - AACCCGUAGAUCCGAACUUGUG - 52
Evidence not_experimental

Mature ofu-miR-100-3p

Accession MIMAT0068419
Description Owenia fusiformis ofu-miR-100-3p mature miRNA
Sequence 66 - CAAGCUCGACUCUAUGGGUCUG - 87
Evidence not_experimental

References