miRBase entry: agr-mir-2f

Stem-loop agr-mir-2f


Accession
MI0044833
Description
Acanthopleura granulata agr-mir-2f precursor miRNA


Sequence


ugucagauguacugcaugugauggguaacacUGACCAAGUCUCUGUGGUUUGcugauucugaugucaUAUCACAGCUGCUUGGAUCAGCaugacgugucacaaauaucugcacaugugu
((((((((((......(((((((.((....((((((((((..(((((((....((((......)))).)))))))..)))))).))))....)).))))))).))))))).))).....

Structure
-----   -       acugca       g  aaca    -      CU       UUGc    uc 
     ugu cagaugu      ugugaug gu    cUGA CCAAGU  CUGUGGU    ugau  u
     ||| |||||||      ||||||| ||    |||| ||||||  |||||||    ||||   
     aca gucuaua      acacugu ca    GACU GGUUCG  GACACUA    acug  g
ugugu   c       -----a       g  guaC    A      UC       ---U    ua 


Annotation confidence Not enough data
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Genome context
JABBOT010000002.1: 46258275-46258333 []
Clustered miRNAs
5 other miRNAs are < 10 kb from agr-mir-2f
Name Accession Chromosome Start End Strand Confidence




Database links

Mature agr-miR-2f-5p

Accession MIMAT0068580
Description Acanthopleura granulata agr-miR-2f-5p mature miRNA
Sequence 32 - UGACCAAGUCUCUGUGGUUUG - 52
Evidence not_experimental

Mature agr-miR-2f-3p

Accession MIMAT0068579
Description Acanthopleura granulata agr-miR-2f-3p mature miRNA
Sequence 68 - UAUCACAGCUGCUUGGAUCAGC - 89
Evidence not_experimental

References